STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OON62440.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (182 aa)    
Predicted Functional Partners:
OON64584.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.992
OON62441.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.958
OON62437.1
Formate dehydrogenase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.935
OON62435.1
Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.917
OON62434.1
Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.901
OON64583.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.895
fdhD-2
Sulfurtransferase FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
     0.752
OON60796.1
Tungsten ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.719
OON62436.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.716
OON62438.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.702
Your Current Organism:
Massilia sp. KIM
NCBI taxonomy Id: 1955422
Other names: M. sp. KIM
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