STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OON62453.1XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)    
Predicted Functional Partners:
OON62065.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.771
nadE
NAD(+) synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.686
OON62451.1
Dipeptide epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.667
OON62452.1
Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.637
OON62450.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.591
argA
Amino-acid N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the acetyltransferase family. ArgA subfamily.
    
  0.590
OON64586.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.570
OON62449.1
EBNA-1 nuclear protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.531
OON59588.1
GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.498
OON61271.1
Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.479
Your Current Organism:
Massilia sp. KIM
NCBI taxonomy Id: 1955422
Other names: M. sp. KIM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.