STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OON62750.1LLM class oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa)    
Predicted Functional Partners:
OON63977.1
CDP-6-deoxy-delta-3,4-glucoseen reductase; Catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.803
OON60479.1
Nitrilotriacetate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.628
OON62038.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.622
OON62150.1
ACP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.622
OON63222.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.622
OON59745.1
Arsenical resistance protein ArsH; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.616
OON59932.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.575
OON62739.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.572
OON60568.1
Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.572
OON62090.1
Taurine dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.532
Your Current Organism:
Massilia sp. KIM
NCBI taxonomy Id: 1955422
Other names: M. sp. KIM
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