STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OON63140.1GGDEF domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (664 aa)    
Predicted Functional Partners:
OON61271.1
Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.972
OON63731.1
Bifunctional diguanylate cyclase/phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.881
OON64597.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.876
OON63679.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.875
B0920_17445
Ketosteroid isomerase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.872
OON62662.1
Oxygen sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.871
OON64673.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.866
OON62406.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.860
OON64273.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.856
B0920_03235
Methyl-accepting chemotaxis protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.847
Your Current Organism:
Massilia sp. KIM
NCBI taxonomy Id: 1955422
Other names: M. sp. KIM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.