OON61150.1 protein (Massilia sp. KIM) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

OON61150.1

Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (542 aa)

Predicted Functional Partners:

OON62490.1

0.999

OON62516.1

0.999

OON62535.1

0.998

OON61217.1

0.998

OON62827.1

0.997

OON63679.1

0.996

OON63731.1

0.996

OON61271.1

0.993

OON60651.1

0.991

OON62044.1

0.988

Your Current Organism:

Massilia sp. KIM

NCBI taxonomy Id: 1955422
Other names: M. sp. KIM

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OON60651.1	OON61150.1	B0920_16930	B0920_19710	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
OON60651.1	OON61217.1	B0920_16930	B0920_20100	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component system sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OON60651.1	OON61271.1	B0920_16930	B0920_16135	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OON60651.1	OON62044.1	B0920_16930	B0920_00675	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OON60651.1	OON62490.1	B0920_16930	B0920_03265	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OON60651.1	OON62516.1	B0920_16930	B0920_03425	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OON60651.1	OON62535.1	B0920_16930	B0920_03535	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OON60651.1	OON62827.1	B0920_16930	B0920_05175	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheV; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OON60651.1	OON63679.1	B0920_16930	B0920_10090	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
OON60651.1	OON63731.1	B0920_16930	B0920_10370	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Bifunctional diguanylate cyclase/phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
OON61150.1	OON60651.1	B0920_19710	B0920_16930	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
OON61150.1	OON61217.1	B0920_19710	B0920_20100	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component system sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
OON61150.1	OON61271.1	B0920_19710	B0920_16135	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
OON61150.1	OON62044.1	B0920_19710	B0920_00675	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988
OON61150.1	OON62490.1	B0920_19710	B0920_03265	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OON61150.1	OON62516.1	B0920_19710	B0920_03425	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OON61150.1	OON62535.1	B0920_19710	B0920_03535	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
OON61150.1	OON62827.1	B0920_19710	B0920_05175	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheV; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
OON61150.1	OON63679.1	B0920_19710	B0920_10090	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
OON61150.1	OON63731.1	B0920_19710	B0920_10370	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Bifunctional diguanylate cyclase/phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996