STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000720555_04196Unannotated protein. (95 aa)    
Predicted Functional Partners:
GCA_000720555_04195
Unannotated protein.
 
 
 
 0.957
GCA_000720555_01114
Unannotated protein.
 
 
 
 0.853
GCA_000720555_02975
Unannotated protein.
 
 
 
 0.835
GCA_000720555_00600
Unannotated protein.
   
 
 0.793
GCA_000720555_07035
Unannotated protein.
   
 
 0.793
GCA_000720555_00855
Unannotated protein.
   
 
 0.791
GCA_000720555_03885
Unannotated protein.
   
 
 0.791
GCA_000720555_04532
Unannotated protein.
   
 
 0.791
GCA_000720555_07036
Unannotated protein.
  
     0.578
GCA_000720555_06363
Unannotated protein.
  
     0.538
Your Current Organism:
Streptomyces sclerotialus
NCBI taxonomy Id: 1957
Other names: ATCC 15721, BCRC 13307, CBS 167.62, CCRC 13307, CCRC:13307, Chainia antibiotica, DSM 43032, IFO 12246, IFO 13356, IFO 13904, ISP 5269, JCM 3039, JCM 4828, KCTC 9065, NBRC 12246, NBRC 13356, NBRC 13904, NRRL B-2317, NRRL-ISP 5269, S. sclerotialus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.