STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000720555_04941Unannotated protein. (176 aa)    
Predicted Functional Partners:
GCA_000720555_04942
Unannotated protein.
       0.766
GCA_000720555_04939
Unannotated protein.
       0.726
GCA_000720555_04940
Unannotated protein.
       0.726
GCA_000720555_04943
Unannotated protein.
       0.711
GCA_000720555_04938
Unannotated protein.
       0.705
GCA_000720555_04937
Unannotated protein.
       0.664
GCA_000720555_04545
Unannotated protein.
  
  
 0.572
GCA_000720555_07011
Unannotated protein.
  
     0.562
GCA_000720555_03681
Unannotated protein.
  
    0.545
GCA_000720555_05717
Unannotated protein.
  
    0.531
Your Current Organism:
Streptomyces sclerotialus
NCBI taxonomy Id: 1957
Other names: ATCC 15721, BCRC 13307, CBS 167.62, CCRC 13307, CCRC:13307, Chainia antibiotica, DSM 43032, IFO 12246, IFO 13356, IFO 13904, ISP 5269, JCM 3039, JCM 4828, KCTC 9065, NBRC 12246, NBRC 13356, NBRC 13904, NRRL B-2317, NRRL-ISP 5269, S. sclerotialus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.