Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000715605_00293 | mdtD | GCA_000715605_00293 | GCA_000715605_00292 | Hypothetical protein. | Putative multidrug resistance protein MdtD. | 0.429 |
GCA_000715605_05123 | cvaA | GCA_000715605_05123 | GCA_000715605_07551 | Hypothetical protein. | Colicin V secretion protein CvaA. | 0.499 |
GCA_000715605_05123 | mdtD | GCA_000715605_05123 | GCA_000715605_00292 | Hypothetical protein. | Putative multidrug resistance protein MdtD. | 0.472 |
cvaA | GCA_000715605_05123 | GCA_000715605_07551 | GCA_000715605_05123 | Colicin V secretion protein CvaA. | Hypothetical protein. | 0.499 |
cvaA | mdtD | GCA_000715605_07551 | GCA_000715605_00292 | Colicin V secretion protein CvaA. | Putative multidrug resistance protein MdtD. | 0.618 |
kce | kynB | GCA_000715605_00392 | GCA_000715605_00548 | 3-keto-5-aminohexanoate cleavage enzyme. | Kynurenine formamidase. | 0.917 |
kce | mdtD | GCA_000715605_00392 | GCA_000715605_00292 | 3-keto-5-aminohexanoate cleavage enzyme. | Putative multidrug resistance protein MdtD. | 0.511 |
kynB | kce | GCA_000715605_00548 | GCA_000715605_00392 | Kynurenine formamidase. | 3-keto-5-aminohexanoate cleavage enzyme. | 0.917 |
kynB | mdtD | GCA_000715605_00548 | GCA_000715605_00292 | Kynurenine formamidase. | Putative multidrug resistance protein MdtD. | 0.534 |
mdtD | GCA_000715605_00293 | GCA_000715605_00292 | GCA_000715605_00293 | Putative multidrug resistance protein MdtD. | Hypothetical protein. | 0.429 |
mdtD | GCA_000715605_05123 | GCA_000715605_00292 | GCA_000715605_05123 | Putative multidrug resistance protein MdtD. | Hypothetical protein. | 0.472 |
mdtD | cvaA | GCA_000715605_00292 | GCA_000715605_07551 | Putative multidrug resistance protein MdtD. | Colicin V secretion protein CvaA. | 0.618 |
mdtD | kce | GCA_000715605_00292 | GCA_000715605_00392 | Putative multidrug resistance protein MdtD. | 3-keto-5-aminohexanoate cleavage enzyme. | 0.511 |
mdtD | kynB | GCA_000715605_00292 | GCA_000715605_00548 | Putative multidrug resistance protein MdtD. | Kynurenine formamidase. | 0.534 |
mdtD | tcmI | GCA_000715605_00292 | GCA_000715605_08456 | Putative multidrug resistance protein MdtD. | Tetracenomycin F2 cyclase. | 0.427 |
tcmI | mdtD | GCA_000715605_08456 | GCA_000715605_00292 | Tetracenomycin F2 cyclase. | Putative multidrug resistance protein MdtD. | 0.427 |