Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000715605_05123 | GCA_000715605_08790 | GCA_000715605_05123 | GCA_000715605_08790 | Hypothetical protein. | Long-chain-fatty-acid--AMP ligase FadD26. | 0.999 |
GCA_000715605_05123 | acsA_1 | GCA_000715605_05123 | GCA_000715605_03433 | Hypothetical protein. | Acetyl-coenzyme A synthetase. | 0.912 |
GCA_000715605_05123 | acsA_2 | GCA_000715605_05123 | GCA_000715605_05776 | Hypothetical protein. | Acetyl-coenzyme A synthetase. | 0.912 |
GCA_000715605_05123 | betB_2 | GCA_000715605_05123 | GCA_000715605_05024 | Hypothetical protein. | NAD/NADP-dependent betaine aldehyde dehydrogenase. | 0.811 |
GCA_000715605_05123 | citA_1 | GCA_000715605_05123 | GCA_000715605_01255 | Hypothetical protein. | Putative citrate synthase 2. | 0.885 |
GCA_000715605_05123 | citA_2 | GCA_000715605_05123 | GCA_000715605_02620 | Hypothetical protein. | Putative citrate synthase 2. | 0.885 |
GCA_000715605_05123 | davD | GCA_000715605_05123 | GCA_000715605_00385 | Hypothetical protein. | Glutarate-semialdehyde dehydrogenase DavD. | 0.811 |
GCA_000715605_05123 | dhbF_1 | GCA_000715605_05123 | GCA_000715605_04924 | Hypothetical protein. | Dimodular nonribosomal peptide synthase. | 0.999 |
GCA_000715605_05123 | gltB | GCA_000715605_05123 | GCA_000715605_03081 | Hypothetical protein. | Glutamate synthase [NADPH] large chain. | 0.981 |
GCA_000715605_05123 | ppsC_2 | GCA_000715605_05123 | GCA_000715605_04935 | Hypothetical protein. | Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsC. | 0.999 |
GCA_000715605_08790 | GCA_000715605_05123 | GCA_000715605_08790 | GCA_000715605_05123 | Long-chain-fatty-acid--AMP ligase FadD26. | Hypothetical protein. | 0.999 |
GCA_000715605_08790 | acsA_1 | GCA_000715605_08790 | GCA_000715605_03433 | Long-chain-fatty-acid--AMP ligase FadD26. | Acetyl-coenzyme A synthetase. | 0.940 |
GCA_000715605_08790 | acsA_2 | GCA_000715605_08790 | GCA_000715605_05776 | Long-chain-fatty-acid--AMP ligase FadD26. | Acetyl-coenzyme A synthetase. | 0.942 |
GCA_000715605_08790 | betB_2 | GCA_000715605_08790 | GCA_000715605_05024 | Long-chain-fatty-acid--AMP ligase FadD26. | NAD/NADP-dependent betaine aldehyde dehydrogenase. | 0.893 |
GCA_000715605_08790 | citA_1 | GCA_000715605_08790 | GCA_000715605_01255 | Long-chain-fatty-acid--AMP ligase FadD26. | Putative citrate synthase 2. | 0.878 |
GCA_000715605_08790 | citA_2 | GCA_000715605_08790 | GCA_000715605_02620 | Long-chain-fatty-acid--AMP ligase FadD26. | Putative citrate synthase 2. | 0.878 |
GCA_000715605_08790 | davD | GCA_000715605_08790 | GCA_000715605_00385 | Long-chain-fatty-acid--AMP ligase FadD26. | Glutarate-semialdehyde dehydrogenase DavD. | 0.893 |
GCA_000715605_08790 | dhbF_1 | GCA_000715605_08790 | GCA_000715605_04924 | Long-chain-fatty-acid--AMP ligase FadD26. | Dimodular nonribosomal peptide synthase. | 0.999 |
GCA_000715605_08790 | gltB | GCA_000715605_08790 | GCA_000715605_03081 | Long-chain-fatty-acid--AMP ligase FadD26. | Glutamate synthase [NADPH] large chain. | 0.960 |
GCA_000715605_08790 | ppsC_2 | GCA_000715605_08790 | GCA_000715605_04935 | Long-chain-fatty-acid--AMP ligase FadD26. | Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsC. | 0.999 |
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