Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
oppA_1 | osmX_1 | GCA_000715605_02252 | GCA_000715605_05614 | Oligopeptide-binding protein OppA. | Osmoprotectant-binding protein OsmX. | 0.976 |
oppA_1 | potA_1 | GCA_000715605_02252 | GCA_000715605_00397 | Oligopeptide-binding protein OppA. | Spermidine/putrescine import ATP-binding protein PotA. | 0.963 |
oppA_1 | potA_2 | GCA_000715605_02252 | GCA_000715605_04088 | Oligopeptide-binding protein OppA. | Spermidine/putrescine import ATP-binding protein PotA. | 0.974 |
oppA_1 | znuB | GCA_000715605_02252 | GCA_000715605_05233 | Oligopeptide-binding protein OppA. | High-affinity zinc uptake system membrane protein ZnuB. | 0.974 |
opuAB_2 | osmX_1 | GCA_000715605_07915 | GCA_000715605_05614 | Glycine betaine transport system permease protein OpuAB. | Osmoprotectant-binding protein OsmX. | 0.984 |
opuAB_2 | potA_1 | GCA_000715605_07915 | GCA_000715605_00397 | Glycine betaine transport system permease protein OpuAB. | Spermidine/putrescine import ATP-binding protein PotA. | 0.965 |
opuAB_2 | potA_2 | GCA_000715605_07915 | GCA_000715605_04088 | Glycine betaine transport system permease protein OpuAB. | Spermidine/putrescine import ATP-binding protein PotA. | 0.976 |
opuAB_2 | potB | GCA_000715605_07915 | GCA_000715605_04111 | Glycine betaine transport system permease protein OpuAB. | Spermidine/putrescine transport system permease protein PotB. | 0.928 |
opuAB_2 | potH_1 | GCA_000715605_07915 | GCA_000715605_00395 | Glycine betaine transport system permease protein OpuAB. | Putrescine transport system permease protein PotH. | 0.928 |
opuAB_2 | potH_2 | GCA_000715605_07915 | GCA_000715605_09310 | Glycine betaine transport system permease protein OpuAB. | Putrescine transport system permease protein PotH. | 0.928 |
opuAB_2 | sugB_1 | GCA_000715605_07915 | GCA_000715605_00396 | Glycine betaine transport system permease protein OpuAB. | Trehalose transport system permease protein SugB. | 0.930 |
opuAB_2 | ydcV_1 | GCA_000715605_07915 | GCA_000715605_04112 | Glycine betaine transport system permease protein OpuAB. | Inner membrane ABC transporter permease protein YdcV. | 0.930 |
opuAB_2 | znuB | GCA_000715605_07915 | GCA_000715605_05233 | Glycine betaine transport system permease protein OpuAB. | High-affinity zinc uptake system membrane protein ZnuB. | 0.979 |
osmX_1 | oppA_1 | GCA_000715605_05614 | GCA_000715605_02252 | Osmoprotectant-binding protein OsmX. | Oligopeptide-binding protein OppA. | 0.976 |
osmX_1 | opuAB_2 | GCA_000715605_05614 | GCA_000715605_07915 | Osmoprotectant-binding protein OsmX. | Glycine betaine transport system permease protein OpuAB. | 0.984 |
osmX_1 | potA_1 | GCA_000715605_05614 | GCA_000715605_00397 | Osmoprotectant-binding protein OsmX. | Spermidine/putrescine import ATP-binding protein PotA. | 0.963 |
osmX_1 | potA_2 | GCA_000715605_05614 | GCA_000715605_04088 | Osmoprotectant-binding protein OsmX. | Spermidine/putrescine import ATP-binding protein PotA. | 0.974 |
potA_1 | oppA_1 | GCA_000715605_00397 | GCA_000715605_02252 | Spermidine/putrescine import ATP-binding protein PotA. | Oligopeptide-binding protein OppA. | 0.963 |
potA_1 | opuAB_2 | GCA_000715605_00397 | GCA_000715605_07915 | Spermidine/putrescine import ATP-binding protein PotA. | Glycine betaine transport system permease protein OpuAB. | 0.965 |
potA_1 | osmX_1 | GCA_000715605_00397 | GCA_000715605_05614 | Spermidine/putrescine import ATP-binding protein PotA. | Osmoprotectant-binding protein OsmX. | 0.963 |
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