Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000715605_00697 | ilvE | GCA_000715605_00697 | GCA_000715605_00695 | Hypothetical protein. | Branched-chain-amino-acid aminotransferase. | 0.657 |
GCA_000715605_00697 | leuB | GCA_000715605_00697 | GCA_000715605_00696 | Hypothetical protein. | 3-isopropylmalate dehydrogenase. | 0.773 |
GCA_000715605_00697 | putB | GCA_000715605_00697 | GCA_000715605_00699 | Hypothetical protein. | Proline dehydrogenase 2. | 0.663 |
GCA_000715605_00697 | rocA | GCA_000715605_00697 | GCA_000715605_00698 | Hypothetical protein. | 1-pyrroline-5-carboxylate dehydrogenase. | 0.691 |
ilvE | GCA_000715605_00697 | GCA_000715605_00695 | GCA_000715605_00697 | Branched-chain-amino-acid aminotransferase. | Hypothetical protein. | 0.657 |
ilvE | leuB | GCA_000715605_00695 | GCA_000715605_00696 | Branched-chain-amino-acid aminotransferase. | 3-isopropylmalate dehydrogenase. | 0.856 |
ilvE | putB | GCA_000715605_00695 | GCA_000715605_00699 | Branched-chain-amino-acid aminotransferase. | Proline dehydrogenase 2. | 0.624 |
ilvE | rocA | GCA_000715605_00695 | GCA_000715605_00698 | Branched-chain-amino-acid aminotransferase. | 1-pyrroline-5-carboxylate dehydrogenase. | 0.799 |
leuB | GCA_000715605_00697 | GCA_000715605_00696 | GCA_000715605_00697 | 3-isopropylmalate dehydrogenase. | Hypothetical protein. | 0.773 |
leuB | ilvE | GCA_000715605_00696 | GCA_000715605_00695 | 3-isopropylmalate dehydrogenase. | Branched-chain-amino-acid aminotransferase. | 0.856 |
leuB | putB | GCA_000715605_00696 | GCA_000715605_00699 | 3-isopropylmalate dehydrogenase. | Proline dehydrogenase 2. | 0.532 |
leuB | rocA | GCA_000715605_00696 | GCA_000715605_00698 | 3-isopropylmalate dehydrogenase. | 1-pyrroline-5-carboxylate dehydrogenase. | 0.729 |
putB | GCA_000715605_00697 | GCA_000715605_00699 | GCA_000715605_00697 | Proline dehydrogenase 2. | Hypothetical protein. | 0.663 |
putB | ilvE | GCA_000715605_00699 | GCA_000715605_00695 | Proline dehydrogenase 2. | Branched-chain-amino-acid aminotransferase. | 0.624 |
putB | leuB | GCA_000715605_00699 | GCA_000715605_00696 | Proline dehydrogenase 2. | 3-isopropylmalate dehydrogenase. | 0.532 |
putB | rocA | GCA_000715605_00699 | GCA_000715605_00698 | Proline dehydrogenase 2. | 1-pyrroline-5-carboxylate dehydrogenase. | 0.990 |
rocA | GCA_000715605_00697 | GCA_000715605_00698 | GCA_000715605_00697 | 1-pyrroline-5-carboxylate dehydrogenase. | Hypothetical protein. | 0.691 |
rocA | ilvE | GCA_000715605_00698 | GCA_000715605_00695 | 1-pyrroline-5-carboxylate dehydrogenase. | Branched-chain-amino-acid aminotransferase. | 0.799 |
rocA | leuB | GCA_000715605_00698 | GCA_000715605_00696 | 1-pyrroline-5-carboxylate dehydrogenase. | 3-isopropylmalate dehydrogenase. | 0.729 |
rocA | putB | GCA_000715605_00698 | GCA_000715605_00699 | 1-pyrroline-5-carboxylate dehydrogenase. | Proline dehydrogenase 2. | 0.990 |