Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000715605_02147 | GCA_000715605_02582 | GCA_000715605_02147 | GCA_000715605_02582 | Putative heme-dependent peroxidase. | Hypothetical protein. | 0.890 |
GCA_000715605_02147 | hemE | GCA_000715605_02147 | GCA_000715605_02137 | Putative heme-dependent peroxidase. | Uroporphyrinogen decarboxylase. | 0.610 |
GCA_000715605_02147 | hemY | GCA_000715605_02147 | GCA_000715605_02146 | Putative heme-dependent peroxidase. | Protoporphyrinogen oxidase. | 0.971 |
GCA_000715605_02582 | GCA_000715605_02147 | GCA_000715605_02582 | GCA_000715605_02147 | Hypothetical protein. | Putative heme-dependent peroxidase. | 0.890 |
GCA_000715605_02582 | GCA_000715605_07263 | GCA_000715605_02582 | GCA_000715605_07263 | Hypothetical protein. | Hypothetical protein. | 0.787 |
GCA_000715605_02582 | bchD | GCA_000715605_02582 | GCA_000715605_03356 | Hypothetical protein. | Magnesium-chelatase 60 kDa subunit. | 0.936 |
GCA_000715605_02582 | hemA | GCA_000715605_02582 | GCA_000715605_08982 | Hypothetical protein. | Glutamyl-tRNA reductase. | 0.486 |
GCA_000715605_02582 | hemE | GCA_000715605_02582 | GCA_000715605_02137 | Hypothetical protein. | Uroporphyrinogen decarboxylase. | 0.946 |
GCA_000715605_02582 | hemG | GCA_000715605_02582 | GCA_000715605_07256 | Hypothetical protein. | Protoporphyrinogen IX dehydrogenase [menaquinone]. | 0.906 |
GCA_000715605_02582 | hemY | GCA_000715605_02582 | GCA_000715605_02146 | Hypothetical protein. | Protoporphyrinogen oxidase. | 0.990 |
GCA_000715605_07263 | GCA_000715605_02582 | GCA_000715605_07263 | GCA_000715605_02582 | Hypothetical protein. | Hypothetical protein. | 0.787 |
GCA_000715605_07263 | bchD | GCA_000715605_07263 | GCA_000715605_03356 | Hypothetical protein. | Magnesium-chelatase 60 kDa subunit. | 0.771 |
GCA_000715605_07263 | hemG | GCA_000715605_07263 | GCA_000715605_07256 | Hypothetical protein. | Protoporphyrinogen IX dehydrogenase [menaquinone]. | 0.759 |
GCA_000715605_07263 | hemN | GCA_000715605_07263 | GCA_000715605_05296 | Hypothetical protein. | Oxygen-independent coproporphyrinogen-III oxidase-like protein. | 0.782 |
GCA_000715605_07263 | hemY | GCA_000715605_07263 | GCA_000715605_02146 | Hypothetical protein. | Protoporphyrinogen oxidase. | 0.754 |
bchD | GCA_000715605_02582 | GCA_000715605_03356 | GCA_000715605_02582 | Magnesium-chelatase 60 kDa subunit. | Hypothetical protein. | 0.936 |
bchD | GCA_000715605_07263 | GCA_000715605_03356 | GCA_000715605_07263 | Magnesium-chelatase 60 kDa subunit. | Hypothetical protein. | 0.771 |
bchD | hemA | GCA_000715605_03356 | GCA_000715605_08982 | Magnesium-chelatase 60 kDa subunit. | Glutamyl-tRNA reductase. | 0.424 |
bchD | hemE | GCA_000715605_03356 | GCA_000715605_02137 | Magnesium-chelatase 60 kDa subunit. | Uroporphyrinogen decarboxylase. | 0.566 |
bchD | hemG | GCA_000715605_03356 | GCA_000715605_07256 | Magnesium-chelatase 60 kDa subunit. | Protoporphyrinogen IX dehydrogenase [menaquinone]. | 0.900 |
page 1 of 3