Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000715605_00179 | carB | GCA_000715605_00179 | GCA_000715605_03876 | Aspartate aminotransferase. | Carbamoyl-phosphate synthase large chain. | 0.538 |
GCA_000715605_00179 | gdh_1 | GCA_000715605_00179 | GCA_000715605_04719 | Aspartate aminotransferase. | NADP-specific glutamate dehydrogenase. | 0.892 |
GCA_000715605_00179 | gltB | GCA_000715605_00179 | GCA_000715605_03081 | Aspartate aminotransferase. | Glutamate synthase [NADPH] large chain. | 0.944 |
GCA_000715605_00179 | gltD | GCA_000715605_00179 | GCA_000715605_03084 | Aspartate aminotransferase. | Glutamate synthase [NADPH] small chain. | 0.901 |
GCA_000715605_00179 | korA | GCA_000715605_00179 | GCA_000715605_06339 | Aspartate aminotransferase. | 2-oxoglutarate oxidoreductase subunit KorA. | 0.911 |
GCA_000715605_00179 | korB | GCA_000715605_00179 | GCA_000715605_06337 | Aspartate aminotransferase. | 2-oxoglutarate oxidoreductase subunit KorB. | 0.892 |
carB | GCA_000715605_00179 | GCA_000715605_03876 | GCA_000715605_00179 | Carbamoyl-phosphate synthase large chain. | Aspartate aminotransferase. | 0.538 |
carB | gdh_1 | GCA_000715605_03876 | GCA_000715605_04719 | Carbamoyl-phosphate synthase large chain. | NADP-specific glutamate dehydrogenase. | 0.876 |
carB | glnA_1 | GCA_000715605_03876 | GCA_000715605_08681 | Carbamoyl-phosphate synthase large chain. | Glutamine synthetase. | 0.904 |
carB | gltB | GCA_000715605_03876 | GCA_000715605_03081 | Carbamoyl-phosphate synthase large chain. | Glutamate synthase [NADPH] large chain. | 0.988 |
carB | gltD | GCA_000715605_03876 | GCA_000715605_03084 | Carbamoyl-phosphate synthase large chain. | Glutamate synthase [NADPH] small chain. | 0.920 |
gdh_1 | GCA_000715605_00179 | GCA_000715605_04719 | GCA_000715605_00179 | NADP-specific glutamate dehydrogenase. | Aspartate aminotransferase. | 0.892 |
gdh_1 | carB | GCA_000715605_04719 | GCA_000715605_03876 | NADP-specific glutamate dehydrogenase. | Carbamoyl-phosphate synthase large chain. | 0.876 |
gdh_1 | glnA_1 | GCA_000715605_04719 | GCA_000715605_08681 | NADP-specific glutamate dehydrogenase. | Glutamine synthetase. | 0.949 |
gdh_1 | gltB | GCA_000715605_04719 | GCA_000715605_03081 | NADP-specific glutamate dehydrogenase. | Glutamate synthase [NADPH] large chain. | 0.999 |
gdh_1 | gltD | GCA_000715605_04719 | GCA_000715605_03084 | NADP-specific glutamate dehydrogenase. | Glutamate synthase [NADPH] small chain. | 0.954 |
gdh_1 | korA | GCA_000715605_04719 | GCA_000715605_06339 | NADP-specific glutamate dehydrogenase. | 2-oxoglutarate oxidoreductase subunit KorA. | 0.939 |
gdh_1 | korB | GCA_000715605_04719 | GCA_000715605_06337 | NADP-specific glutamate dehydrogenase. | 2-oxoglutarate oxidoreductase subunit KorB. | 0.906 |
gdh_1 | paaE_1 | GCA_000715605_04719 | GCA_000715605_01633 | NADP-specific glutamate dehydrogenase. | 1,2-phenylacetyl-CoA epoxidase, subunit E. | 0.642 |
gdh_1 | paaE_2 | GCA_000715605_04719 | GCA_000715605_03009 | NADP-specific glutamate dehydrogenase. | 1,2-phenylacetyl-CoA epoxidase, subunit E. | 0.646 |
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