Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000715605_01661 | GCA_000715605_03894 | GCA_000715605_01661 | GCA_000715605_03894 | Hypothetical protein. | Putative methyltransferase. | 0.883 |
GCA_000715605_01661 | GCA_000715605_04295 | GCA_000715605_01661 | GCA_000715605_04295 | Hypothetical protein. | Hypothetical protein. | 0.932 |
GCA_000715605_01661 | atpD | GCA_000715605_01661 | GCA_000715605_03967 | Hypothetical protein. | ATP synthase subunit beta. | 0.799 |
GCA_000715605_01661 | pnp | GCA_000715605_01661 | GCA_000715605_00959 | Hypothetical protein. | Polyribonucleotide nucleotidyltransferase. | 0.845 |
GCA_000715605_01661 | rplJ | GCA_000715605_01661 | GCA_000715605_00172 | Hypothetical protein. | 50S ribosomal protein L10. | 0.998 |
GCA_000715605_01661 | rplW | GCA_000715605_01661 | GCA_000715605_04713 | Hypothetical protein. | 50S ribosomal protein L23. | 0.998 |
GCA_000715605_01661 | rpmD | GCA_000715605_01661 | GCA_000715605_04697 | Hypothetical protein. | 50S ribosomal protein L30. | 0.997 |
GCA_000715605_01661 | stiP | GCA_000715605_01661 | GCA_000715605_02937 | Hypothetical protein. | Cysteine protease StiP. | 0.998 |
GCA_000715605_03894 | GCA_000715605_01661 | GCA_000715605_03894 | GCA_000715605_01661 | Putative methyltransferase. | Hypothetical protein. | 0.883 |
GCA_000715605_03894 | GCA_000715605_04295 | GCA_000715605_03894 | GCA_000715605_04295 | Putative methyltransferase. | Hypothetical protein. | 0.963 |
GCA_000715605_03894 | atpD | GCA_000715605_03894 | GCA_000715605_03967 | Putative methyltransferase. | ATP synthase subunit beta. | 0.641 |
GCA_000715605_03894 | nnr | GCA_000715605_03894 | GCA_000715605_09032 | Putative methyltransferase. | Bifunctional NAD(P)H-hydrate repair enzyme Nnr. | 0.526 |
GCA_000715605_03894 | pnp | GCA_000715605_03894 | GCA_000715605_00959 | Putative methyltransferase. | Polyribonucleotide nucleotidyltransferase. | 0.543 |
GCA_000715605_03894 | rplD | GCA_000715605_03894 | GCA_000715605_04714 | Putative methyltransferase. | 50S ribosomal protein L4. | 0.883 |
GCA_000715605_03894 | rplJ | GCA_000715605_03894 | GCA_000715605_00172 | Putative methyltransferase. | 50S ribosomal protein L10. | 0.993 |
GCA_000715605_03894 | rplW | GCA_000715605_03894 | GCA_000715605_04713 | Putative methyltransferase. | 50S ribosomal protein L23. | 0.990 |
GCA_000715605_03894 | rpmD | GCA_000715605_03894 | GCA_000715605_04697 | Putative methyltransferase. | 50S ribosomal protein L30. | 0.992 |
GCA_000715605_03894 | stiP | GCA_000715605_03894 | GCA_000715605_02937 | Putative methyltransferase. | Cysteine protease StiP. | 0.906 |
GCA_000715605_04295 | GCA_000715605_01661 | GCA_000715605_04295 | GCA_000715605_01661 | Hypothetical protein. | Hypothetical protein. | 0.932 |
GCA_000715605_04295 | GCA_000715605_03894 | GCA_000715605_04295 | GCA_000715605_03894 | Hypothetical protein. | Putative methyltransferase. | 0.963 |
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