Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000715605_05297 | hemN | GCA_000715605_05297 | GCA_000715605_05296 | Hypothetical protein. | Oxygen-independent coproporphyrinogen-III oxidase-like protein. | 0.826 |
GCA_000715605_05297 | lepA | GCA_000715605_05297 | GCA_000715605_05305 | Hypothetical protein. | Elongation factor 4. | 0.508 |
GCA_000715605_05297 | srrA | GCA_000715605_05297 | GCA_000715605_06220 | Hypothetical protein. | Transcriptional regulatory protein SrrA. | 0.781 |
GCA_000715605_07263 | hemG | GCA_000715605_07263 | GCA_000715605_07256 | Hypothetical protein. | Protoporphyrinogen IX dehydrogenase [menaquinone]. | 0.759 |
GCA_000715605_07263 | hemN | GCA_000715605_07263 | GCA_000715605_05296 | Hypothetical protein. | Oxygen-independent coproporphyrinogen-III oxidase-like protein. | 0.782 |
GCA_000715605_07263 | hemY | GCA_000715605_07263 | GCA_000715605_02146 | Hypothetical protein. | Protoporphyrinogen oxidase. | 0.754 |
GCA_000715605_10076 | hemE | GCA_000715605_10076 | GCA_000715605_02137 | Hypothetical protein. | Uroporphyrinogen decarboxylase. | 0.917 |
GCA_000715605_10076 | hemN | GCA_000715605_10076 | GCA_000715605_05296 | Hypothetical protein. | Oxygen-independent coproporphyrinogen-III oxidase-like protein. | 0.663 |
GCA_000715605_10076 | nasF | GCA_000715605_10076 | GCA_000715605_08980 | Hypothetical protein. | Uroporphyrinogen-III C-methyltransferase. | 0.553 |
gltB | hemE | GCA_000715605_03081 | GCA_000715605_02137 | Glutamate synthase [NADPH] large chain. | Uroporphyrinogen decarboxylase. | 0.935 |
gltB | hemN | GCA_000715605_03081 | GCA_000715605_05296 | Glutamate synthase [NADPH] large chain. | Oxygen-independent coproporphyrinogen-III oxidase-like protein. | 0.702 |
gltB | lepA | GCA_000715605_03081 | GCA_000715605_05305 | Glutamate synthase [NADPH] large chain. | Elongation factor 4. | 0.877 |
gltB | nasF | GCA_000715605_03081 | GCA_000715605_08980 | Glutamate synthase [NADPH] large chain. | Uroporphyrinogen-III C-methyltransferase. | 0.653 |
gltB | srrA | GCA_000715605_03081 | GCA_000715605_06220 | Glutamate synthase [NADPH] large chain. | Transcriptional regulatory protein SrrA. | 0.901 |
hemE | GCA_000715605_10076 | GCA_000715605_02137 | GCA_000715605_10076 | Uroporphyrinogen decarboxylase. | Hypothetical protein. | 0.917 |
hemE | gltB | GCA_000715605_02137 | GCA_000715605_03081 | Uroporphyrinogen decarboxylase. | Glutamate synthase [NADPH] large chain. | 0.935 |
hemE | hemN | GCA_000715605_02137 | GCA_000715605_05296 | Uroporphyrinogen decarboxylase. | Oxygen-independent coproporphyrinogen-III oxidase-like protein. | 0.905 |
hemE | hemY | GCA_000715605_02137 | GCA_000715605_02146 | Uroporphyrinogen decarboxylase. | Protoporphyrinogen oxidase. | 0.998 |
hemE | nasF | GCA_000715605_02137 | GCA_000715605_08980 | Uroporphyrinogen decarboxylase. | Uroporphyrinogen-III C-methyltransferase. | 0.945 |
hemG | GCA_000715605_07263 | GCA_000715605_07256 | GCA_000715605_07263 | Protoporphyrinogen IX dehydrogenase [menaquinone]. | Hypothetical protein. | 0.759 |
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