Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000715605_02262 | cbpD | GCA_000715605_02262 | GCA_000715605_06742 | Hypothetical protein. | Chitin-binding protein CbpD. | 0.509 |
GCA_000715605_02262 | celB_1 | GCA_000715605_02262 | GCA_000715605_05733 | Hypothetical protein. | Endoglucanase E-2. | 0.635 |
GCA_000715605_02262 | chtA_2 | GCA_000715605_02262 | GCA_000715605_07666 | Hypothetical protein. | Chitinase 63. | 0.769 |
GCA_000715605_02262 | cpbD_2 | GCA_000715605_02262 | GCA_000715605_05474 | Hypothetical protein. | Chitin-binding protein CbpD. | 0.402 |
GCA_000715605_02262 | xlnC | GCA_000715605_02262 | GCA_000715605_02527 | Hypothetical protein. | Endo-1,4-beta-xylanase C. | 0.699 |
cbpD | GCA_000715605_02262 | GCA_000715605_06742 | GCA_000715605_02262 | Chitin-binding protein CbpD. | Hypothetical protein. | 0.509 |
cbpD | celB_1 | GCA_000715605_06742 | GCA_000715605_05733 | Chitin-binding protein CbpD. | Endoglucanase E-2. | 0.686 |
cbpD | chiA | GCA_000715605_06742 | GCA_000715605_07373 | Chitin-binding protein CbpD. | Putative bifunctional chitinase/lysozyme. | 0.467 |
cbpD | chtA_2 | GCA_000715605_06742 | GCA_000715605_07666 | Chitin-binding protein CbpD. | Chitinase 63. | 0.647 |
cbpD | xlnC | GCA_000715605_06742 | GCA_000715605_02527 | Chitin-binding protein CbpD. | Endo-1,4-beta-xylanase C. | 0.702 |
celB_1 | GCA_000715605_02262 | GCA_000715605_05733 | GCA_000715605_02262 | Endoglucanase E-2. | Hypothetical protein. | 0.635 |
celB_1 | cbpD | GCA_000715605_05733 | GCA_000715605_06742 | Endoglucanase E-2. | Chitin-binding protein CbpD. | 0.686 |
celB_1 | chiA | GCA_000715605_05733 | GCA_000715605_07373 | Endoglucanase E-2. | Putative bifunctional chitinase/lysozyme. | 0.635 |
celB_1 | chtA_2 | GCA_000715605_05733 | GCA_000715605_07666 | Endoglucanase E-2. | Chitinase 63. | 0.578 |
celB_1 | cpbD_2 | GCA_000715605_05733 | GCA_000715605_05474 | Endoglucanase E-2. | Chitin-binding protein CbpD. | 0.629 |
celB_1 | rpoB | GCA_000715605_05733 | GCA_000715605_00170 | Endoglucanase E-2. | DNA-directed RNA polymerase subunit beta. | 0.629 |
celB_1 | rpoC | GCA_000715605_05733 | GCA_000715605_00169 | Endoglucanase E-2. | DNA-directed RNA polymerase subunit beta'. | 0.648 |
celB_1 | rpoZ | GCA_000715605_05733 | GCA_000715605_03881 | Endoglucanase E-2. | DNA-directed RNA polymerase subunit omega. | 0.559 |
celB_1 | rsgA_1 | GCA_000715605_05733 | GCA_000715605_05734 | Endoglucanase E-2. | Small ribosomal subunit biogenesis GTPase RsgA. | 0.698 |
celB_1 | xlnC | GCA_000715605_05733 | GCA_000715605_02527 | Endoglucanase E-2. | Endo-1,4-beta-xylanase C. | 0.570 |
page 1 of 3