Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000715605_00822 | GCA_000715605_06464 | GCA_000715605_00822 | GCA_000715605_06464 | Hypothetical protein. | Hypothetical protein. | 0.627 |
GCA_000715605_00822 | ftsQ | GCA_000715605_00822 | GCA_000715605_06467 | Hypothetical protein. | Cell division protein FtsQ. | 0.989 |
GCA_000715605_00822 | pbpB | GCA_000715605_00822 | GCA_000715605_06474 | Hypothetical protein. | Penicillin-binding protein PbpB. | 0.508 |
GCA_000715605_00822 | rodA_1 | GCA_000715605_00822 | GCA_000715605_01648 | Hypothetical protein. | Putative FtsW-like protein. | 0.518 |
GCA_000715605_00822 | rodA_2 | GCA_000715605_00822 | GCA_000715605_04047 | Hypothetical protein. | Putative FtsW-like protein. | 0.518 |
GCA_000715605_06464 | GCA_000715605_00822 | GCA_000715605_06464 | GCA_000715605_00822 | Hypothetical protein. | Hypothetical protein. | 0.627 |
GCA_000715605_06464 | ftsL | GCA_000715605_06464 | GCA_000715605_06475 | Hypothetical protein. | Cell division protein FtsL. | 0.746 |
GCA_000715605_06464 | ftsQ | GCA_000715605_06464 | GCA_000715605_06467 | Hypothetical protein. | Cell division protein FtsQ. | 0.985 |
GCA_000715605_06464 | ftsW_1 | GCA_000715605_06464 | GCA_000715605_06469 | Hypothetical protein. | Putative peptidoglycan glycosyltransferase FtsW. | 0.926 |
GCA_000715605_06464 | murD_1 | GCA_000715605_06464 | GCA_000715605_06470 | Hypothetical protein. | UDP-N-acetylmuramoylalanine--D-glutamate ligase. | 0.834 |
GCA_000715605_06464 | murF_2 | GCA_000715605_06464 | GCA_000715605_06472 | Hypothetical protein. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase. | 0.761 |
GCA_000715605_06464 | murG | GCA_000715605_06464 | GCA_000715605_06468 | Hypothetical protein. | UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase. | 0.955 |
GCA_000715605_06464 | pbpB | GCA_000715605_06464 | GCA_000715605_06474 | Hypothetical protein. | Penicillin-binding protein PbpB. | 0.901 |
GCA_000715605_06464 | rodA_1 | GCA_000715605_06464 | GCA_000715605_01648 | Hypothetical protein. | Putative FtsW-like protein. | 0.810 |
GCA_000715605_06464 | rodA_2 | GCA_000715605_06464 | GCA_000715605_04047 | Hypothetical protein. | Putative FtsW-like protein. | 0.810 |
ftsL | GCA_000715605_06464 | GCA_000715605_06475 | GCA_000715605_06464 | Cell division protein FtsL. | Hypothetical protein. | 0.746 |
ftsL | ftsQ | GCA_000715605_06475 | GCA_000715605_06467 | Cell division protein FtsL. | Cell division protein FtsQ. | 0.982 |
ftsL | ftsW_1 | GCA_000715605_06475 | GCA_000715605_06469 | Cell division protein FtsL. | Putative peptidoglycan glycosyltransferase FtsW. | 0.651 |
ftsL | murD_1 | GCA_000715605_06475 | GCA_000715605_06470 | Cell division protein FtsL. | UDP-N-acetylmuramoylalanine--D-glutamate ligase. | 0.726 |
ftsL | murF_2 | GCA_000715605_06475 | GCA_000715605_06472 | Cell division protein FtsL. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase. | 0.679 |
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