STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsC_3Ribose import permease protein RbsC. (346 aa)    
Predicted Functional Partners:
lsrB
Autoinducer 2-binding protein LsrB.
 0.998
rbsA_2
Ribose import ATP-binding protein RbsA.
 0.992
lsrD
Autoinducer 2 import system permease protein LsrD.
 
  
 
0.987
araG
Arabinose import ATP-binding protein AraG.
 0.966
rbsA_1
Ribose import ATP-binding protein RbsA.
 0.966
xylG_2
Xylose import ATP-binding protein XylG.
 0.963
ytfQ
ABC transporter periplasmic-binding protein YtfQ.
 0.952
xylG_1
Xylose import ATP-binding protein XylG.
 0.948
rbsB
Ribose import binding protein RbsB.
 
 0.940
mglA_1
Galactose/methyl galactoside import ATP-binding protein MglA.
 0.926
Your Current Organism:
Streptomyces speibonae
NCBI taxonomy Id: 195801
Other names: ATCC BAA-411, CIP 108060, DSM 41797, JCM 12682, KCTC 9973, NBRC 101001, NRRL B-24240, S. speibonae, Streptomyces speibonae Meyers et al. 2003, strain PK-Blue
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.