Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000715605_01720 | ahcY | GCA_000715605_01720 | GCA_000715605_07519 | Hypothetical protein. | Adenosylhomocysteinase. | 0.972 |
GCA_000715605_01720 | carH | GCA_000715605_01720 | GCA_000715605_09220 | Hypothetical protein. | HTH-type transcriptional repressor CarH. | 0.576 |
GCA_000715605_01720 | dmg | GCA_000715605_01720 | GCA_000715605_08217 | Hypothetical protein. | Dimethylglycine oxidase. | 0.739 |
GCA_000715605_01720 | metF | GCA_000715605_01720 | GCA_000715605_06490 | Hypothetical protein. | 5,10-methylenetetrahydrofolate reductase. | 0.987 |
GCA_000715605_01720 | metH | GCA_000715605_01720 | GCA_000715605_07805 | Hypothetical protein. | Methionine synthase. | 0.984 |
GCA_000715605_02970 | carH | GCA_000715605_02970 | GCA_000715605_09220 | Hypothetical protein. | HTH-type transcriptional repressor CarH. | 0.608 |
GCA_000715605_07115 | carH | GCA_000715605_07115 | GCA_000715605_09220 | Hypothetical protein. | HTH-type transcriptional repressor CarH. | 0.600 |
GCA_000715605_07115 | dhbF_1 | GCA_000715605_07115 | GCA_000715605_04924 | Hypothetical protein. | Dimodular nonribosomal peptide synthase. | 0.640 |
GCA_000715605_07115 | dmg | GCA_000715605_07115 | GCA_000715605_08217 | Hypothetical protein. | Dimethylglycine oxidase. | 0.647 |
GCA_000715605_07115 | metF | GCA_000715605_07115 | GCA_000715605_06490 | Hypothetical protein. | 5,10-methylenetetrahydrofolate reductase. | 0.571 |
GCA_000715605_07115 | metH | GCA_000715605_07115 | GCA_000715605_07805 | Hypothetical protein. | Methionine synthase. | 0.905 |
ahcY | GCA_000715605_01720 | GCA_000715605_07519 | GCA_000715605_01720 | Adenosylhomocysteinase. | Hypothetical protein. | 0.972 |
ahcY | carH | GCA_000715605_07519 | GCA_000715605_09220 | Adenosylhomocysteinase. | HTH-type transcriptional repressor CarH. | 0.629 |
ahcY | hemE | GCA_000715605_07519 | GCA_000715605_02137 | Adenosylhomocysteinase. | Uroporphyrinogen decarboxylase. | 0.580 |
ahcY | metF | GCA_000715605_07519 | GCA_000715605_06490 | Adenosylhomocysteinase. | 5,10-methylenetetrahydrofolate reductase. | 0.783 |
ahcY | metH | GCA_000715605_07519 | GCA_000715605_07805 | Adenosylhomocysteinase. | Methionine synthase. | 0.966 |
carH | GCA_000715605_01720 | GCA_000715605_09220 | GCA_000715605_01720 | HTH-type transcriptional repressor CarH. | Hypothetical protein. | 0.576 |
carH | GCA_000715605_02970 | GCA_000715605_09220 | GCA_000715605_02970 | HTH-type transcriptional repressor CarH. | Hypothetical protein. | 0.608 |
carH | GCA_000715605_07115 | GCA_000715605_09220 | GCA_000715605_07115 | HTH-type transcriptional repressor CarH. | Hypothetical protein. | 0.600 |
carH | ahcY | GCA_000715605_09220 | GCA_000715605_07519 | HTH-type transcriptional repressor CarH. | Adenosylhomocysteinase. | 0.629 |
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