Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000715605_01231 | GCA_000715605_09646 | GCA_000715605_01231 | GCA_000715605_09646 | Putative FAD-linked oxidoreductase. | Hypothetical protein. | 0.571 |
GCA_000715605_01231 | glpC | GCA_000715605_01231 | GCA_000715605_10275 | Putative FAD-linked oxidoreductase. | Anaerobic glycerol-3-phosphate dehydrogenase subunit C. | 0.786 |
GCA_000715605_01231 | glpD | GCA_000715605_01231 | GCA_000715605_07795 | Putative FAD-linked oxidoreductase. | Aerobic glycerol-3-phosphate dehydrogenase. | 0.709 |
GCA_000715605_01231 | glpD1_1 | GCA_000715605_01231 | GCA_000715605_09260 | Putative FAD-linked oxidoreductase. | Glycerol-3-phosphate dehydrogenase 1. | 0.709 |
GCA_000715605_01231 | glpD1_2 | GCA_000715605_01231 | GCA_000715605_09471 | Putative FAD-linked oxidoreductase. | Glycerol-3-phosphate dehydrogenase 1. | 0.709 |
GCA_000715605_01231 | glpD2 | GCA_000715605_01231 | GCA_000715605_03539 | Putative FAD-linked oxidoreductase. | Glycerol-3-phosphate dehydrogenase 2. | 0.709 |
GCA_000715605_01231 | glpK_1 | GCA_000715605_01231 | GCA_000715605_03152 | Putative FAD-linked oxidoreductase. | Glycerol kinase. | 0.754 |
GCA_000715605_01231 | glpK_2 | GCA_000715605_01231 | GCA_000715605_07731 | Putative FAD-linked oxidoreductase. | Glycerol kinase. | 0.754 |
GCA_000715605_01231 | lhgO | GCA_000715605_01231 | GCA_000715605_05805 | Putative FAD-linked oxidoreductase. | L-2-hydroxyglutarate oxidase LhgO. | 0.509 |
GCA_000715605_01231 | lutA_2 | GCA_000715605_01231 | GCA_000715605_07640 | Putative FAD-linked oxidoreductase. | Lactate utilization protein A. | 0.456 |
GCA_000715605_09646 | GCA_000715605_01231 | GCA_000715605_09646 | GCA_000715605_01231 | Hypothetical protein. | Putative FAD-linked oxidoreductase. | 0.571 |
GCA_000715605_09646 | glpC | GCA_000715605_09646 | GCA_000715605_10275 | Hypothetical protein. | Anaerobic glycerol-3-phosphate dehydrogenase subunit C. | 0.571 |
GCA_000715605_09646 | glpD | GCA_000715605_09646 | GCA_000715605_07795 | Hypothetical protein. | Aerobic glycerol-3-phosphate dehydrogenase. | 0.748 |
GCA_000715605_09646 | glpD1_1 | GCA_000715605_09646 | GCA_000715605_09260 | Hypothetical protein. | Glycerol-3-phosphate dehydrogenase 1. | 0.664 |
GCA_000715605_09646 | glpD1_2 | GCA_000715605_09646 | GCA_000715605_09471 | Hypothetical protein. | Glycerol-3-phosphate dehydrogenase 1. | 0.664 |
GCA_000715605_09646 | glpD2 | GCA_000715605_09646 | GCA_000715605_03539 | Hypothetical protein. | Glycerol-3-phosphate dehydrogenase 2. | 0.748 |
GCA_000715605_09646 | glpK_1 | GCA_000715605_09646 | GCA_000715605_03152 | Hypothetical protein. | Glycerol kinase. | 0.513 |
GCA_000715605_09646 | glpK_2 | GCA_000715605_09646 | GCA_000715605_07731 | Hypothetical protein. | Glycerol kinase. | 0.513 |
GCA_000715605_09646 | lhgO | GCA_000715605_09646 | GCA_000715605_05805 | Hypothetical protein. | L-2-hydroxyglutarate oxidase LhgO. | 0.502 |
GCA_000715605_09646 | lutA_2 | GCA_000715605_09646 | GCA_000715605_07640 | Hypothetical protein. | Lactate utilization protein A. | 0.640 |
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