STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900176635_00805Unannotated protein. (80 aa)    
Predicted Functional Partners:
GCA_900176635_00804
Unannotated protein.
       0.773
GCA_900176635_00803
Unannotated protein.
       0.550
GCA_900176635_00802
Unannotated protein.
       0.435
GCA_900176635_00806
Unannotated protein.
       0.418
Your Current Organism:
Clostridium merdae
NCBI taxonomy Id: 1958780
Other names: C. merdae, CSUR P2953, Clostridium sp. Marseille-P2953, DSM 103669, strain Marseille-P2953
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.