A0A482WLI7 protein (Laodelphax striatellus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A482WLI7

Rio2_N domain-containing protein. (118 aa)

Predicted Functional Partners:

A0A482WVM2

0.996

A0A482WMC0

0.993

A0A482X5G9

0.989

A0A482WSX7

0.986

A0A482X1U7

0.981

A0A482XQL1

0.972

A0A482WJY9

0.971

A0A482X2Y4

0.970

A0A482XJC6

0.970

A0A482WVR2

0.969

Your Current Organism:

Laodelphax striatellus

NCBI taxonomy Id: 195883
Other names: L. striatellus, Laodelphax striatella, small brown planthopper

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A482WJY9	A0A482WLI7	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	Rio2_N domain-containing protein.	0.971
A0A482WJY9	A0A482WMC0	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.	0.988
A0A482WJY9	A0A482WSX7	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	Uncharacterized protein.	0.991
A0A482WJY9	A0A482WVM2	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	Uncharacterized protein.	0.991
A0A482WJY9	A0A482WVR2	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	Uncharacterized protein.	0.999
A0A482WJY9	A0A482X1U7	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	0.999
A0A482WJY9	A0A482X2Y4	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	Ribosomal_S10 domain-containing protein.	0.997
A0A482WJY9	A0A482X5G9	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	Bms1-type G domain-containing protein.	0.985
A0A482WJY9	A0A482XJC6	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	NUC173 domain-containing protein.	0.879
A0A482WJY9	A0A482XQL1	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	Ribosomal_S7 domain-containing protein.	0.999
A0A482WLI7	A0A482WJY9	Rio2_N domain-containing protein.	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	0.971
A0A482WLI7	A0A482WMC0	Rio2_N domain-containing protein.	RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.	0.993
A0A482WLI7	A0A482WSX7	Rio2_N domain-containing protein.	Uncharacterized protein.	0.986
A0A482WLI7	A0A482WVM2	Rio2_N domain-containing protein.	Uncharacterized protein.	0.996
A0A482WLI7	A0A482WVR2	Rio2_N domain-containing protein.	Uncharacterized protein.	0.969
A0A482WLI7	A0A482X1U7	Rio2_N domain-containing protein.	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	0.981
A0A482WLI7	A0A482X2Y4	Rio2_N domain-containing protein.	Ribosomal_S10 domain-containing protein.	0.970
A0A482WLI7	A0A482X5G9	Rio2_N domain-containing protein.	Bms1-type G domain-containing protein.	0.989
A0A482WLI7	A0A482XJC6	Rio2_N domain-containing protein.	NUC173 domain-containing protein.	0.970
A0A482WLI7	A0A482XQL1	Rio2_N domain-containing protein.	Ribosomal_S7 domain-containing protein.	0.972