A0A482WN00 protein (Laodelphax striatellus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A482WN00

PlsC domain-containing protein. (286 aa)

Predicted Functional Partners:

A0A482XS66

0.812

A0A482XL10

0.735

A0A482XTA4

0.719

A0A482WTG6

0.687

A0A482WV50

0.684

A0A482XLM6

0.679

A0A482XPV5

0.670

A0A482WEW6

0.662

A0A482XBK6

0.647

A0A482WLK9

0.632

Your Current Organism:

Laodelphax striatellus

NCBI taxonomy Id: 195883
Other names: L. striatellus, Laodelphax striatella, small brown planthopper

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A482WEW6	A0A482WLK9	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	ANK_REP_REGION domain-containing protein.	0.453
A0A482WEW6	A0A482WN00	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	PlsC domain-containing protein.	0.662
A0A482WEW6	A0A482WV50	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Glycerol-3-phosphate dehydrogenase [NAD(+)].	0.901
A0A482WEW6	A0A482XLM6	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	PlsC domain-containing protein.	0.654
A0A482WEW6	A0A482XPV5	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	PlsC domain-containing protein; Belongs to the GPAT/DAPAT family.	0.878
A0A482WEW6	A0A482XTA4	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	PlsC domain-containing protein; Belongs to the GPAT/DAPAT family.	0.878
A0A482WLK9	A0A482WEW6	ANK_REP_REGION domain-containing protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.453
A0A482WLK9	A0A482WN00	ANK_REP_REGION domain-containing protein.	PlsC domain-containing protein.	0.632
A0A482WLK9	A0A482WV50	ANK_REP_REGION domain-containing protein.	Glycerol-3-phosphate dehydrogenase [NAD(+)].	0.573
A0A482WLK9	A0A482XBK6	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.439
A0A482WLK9	A0A482XLM6	ANK_REP_REGION domain-containing protein.	PlsC domain-containing protein.	0.632
A0A482WLK9	A0A482XS66	ANK_REP_REGION domain-containing protein.	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.	0.742
A0A482WN00	A0A482WEW6	PlsC domain-containing protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.662
A0A482WN00	A0A482WLK9	PlsC domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.632
A0A482WN00	A0A482WTG6	PlsC domain-containing protein.	LNS2 domain-containing protein.	0.687
A0A482WN00	A0A482WV50	PlsC domain-containing protein.	Glycerol-3-phosphate dehydrogenase [NAD(+)].	0.684
A0A482WN00	A0A482XBK6	PlsC domain-containing protein.	Uncharacterized protein.	0.647
A0A482WN00	A0A482XL10	PlsC domain-containing protein.	Phosphatidate cytidylyltransferase; Belongs to the CDS family.	0.735
A0A482WN00	A0A482XLM6	PlsC domain-containing protein.	PlsC domain-containing protein.	0.679
A0A482WN00	A0A482XPV5	PlsC domain-containing protein.	PlsC domain-containing protein; Belongs to the GPAT/DAPAT family.	0.670