A0A482XLP5 protein (Laodelphax striatellus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A482XLP5

Uncharacterized protein. (779 aa)

Predicted Functional Partners:

A0A482XAT3

0.996

A0A482XBQ8

0.996

A0A482WIW1

0.994

A0A482WKW3

0.971

A0A482XSS4

0.971

A0A482X8E5

0.970

A0A482XFJ2

0.969

A0A482WQM4

0.936

A0A482XG73

0.907

A0A482XFA6

0.898

Your Current Organism:

Laodelphax striatellus

NCBI taxonomy Id: 195883
Other names: L. striatellus, Laodelphax striatella, small brown planthopper

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A482WIW1	A0A482WKW3	Uncharacterized protein.	Uncharacterized protein.	0.988
A0A482WIW1	A0A482WQM4	Uncharacterized protein.	Ribonuclease P protein subunit p20; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences.	0.944
A0A482WIW1	A0A482X8E5	Uncharacterized protein.	Alba domain-containing protein.	0.995
A0A482WIW1	A0A482XAT3	Uncharacterized protein.	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.	0.999
A0A482WIW1	A0A482XBQ8	Uncharacterized protein.	POP4 domain-containing protein.	0.999
A0A482WIW1	A0A482XFJ2	Uncharacterized protein.	Kri1_C domain-containing protein.	0.982
A0A482WIW1	A0A482XG73	Uncharacterized protein.	Uncharacterized protein.	0.943
A0A482WIW1	A0A482XLP5	Uncharacterized protein.	Uncharacterized protein.	0.994
A0A482WIW1	A0A482XSS4	Uncharacterized protein.	Uncharacterized protein.	0.988
A0A482WKW3	A0A482WIW1	Uncharacterized protein.	Uncharacterized protein.	0.988
A0A482WKW3	A0A482WQM4	Uncharacterized protein.	Ribonuclease P protein subunit p20; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences.	0.884
A0A482WKW3	A0A482X8E5	Uncharacterized protein.	Alba domain-containing protein.	0.958
A0A482WKW3	A0A482XAT3	Uncharacterized protein.	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.	0.992
A0A482WKW3	A0A482XBQ8	Uncharacterized protein.	POP4 domain-containing protein.	0.991
A0A482WKW3	A0A482XFA6	Uncharacterized protein.	Uncharacterized protein.	0.813
A0A482WKW3	A0A482XFJ2	Uncharacterized protein.	Kri1_C domain-containing protein.	0.929
A0A482WKW3	A0A482XG73	Uncharacterized protein.	Uncharacterized protein.	0.839
A0A482WKW3	A0A482XLP5	Uncharacterized protein.	Uncharacterized protein.	0.971
A0A482WQM4	A0A482WIW1	Ribonuclease P protein subunit p20; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences.	Uncharacterized protein.	0.944
A0A482WQM4	A0A482WKW3	Ribonuclease P protein subunit p20; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences.	Uncharacterized protein.	0.884