STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A482XRK4Uncharacterized protein. (1532 aa)    
Predicted Functional Partners:
A0A482XF49
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.941
A0A482XFI5
Uncharacterized protein.
   
 0.816
A0A482XLB8
RRM domain-containing protein.
   
 0.816
A0A482XPY7
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.816
A0A482WFH5
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
   
 0.811
A0A482WW49
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
   
 0.811
A0A482XBE3
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
   
 0.811
A0A482WVY0
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...]
    
 0.786
A0A482WQL9
W2 domain-containing protein.
   
 0.784
A0A482XR19
S1 motif domain-containing protein.
   
 0.745
Your Current Organism:
Laodelphax striatellus
NCBI taxonomy Id: 195883
Other names: L. striatellus, Laodelphax striatella, small brown planthopper
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