A0A482XTT3 protein (Laodelphax striatellus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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filled nodes:
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Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

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[Homology]

Score

A0A482XTT3

Uncharacterized protein. (292 aa)

Predicted Functional Partners:

A0A482XA63

0.958

A0A482X481

0.957

A0A482X1U5

0.916

A0A482XA82

0.916

A0A482XDZ8

0.916

A0A482X3E6

0.872

A0A482WQM0

0.871

A0A482WU97

0.871

A0A482XP38

0.871

A0A482WQW8

0.866

Your Current Organism:

Laodelphax striatellus

NCBI taxonomy Id: 195883
Other names: L. striatellus, Laodelphax striatella, small brown planthopper

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A482WQM0	A0A482X1U5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.842
A0A482WQM0	A0A482X3E6	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.703
A0A482WQM0	A0A482X481	Uncharacterized protein.	Uncharacterized protein.	0.932
A0A482WQM0	A0A482XA63	Uncharacterized protein.	Uncharacterized protein.	0.928
A0A482WQM0	A0A482XDZ8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.842
A0A482WQM0	A0A482XTT3	Uncharacterized protein.	Uncharacterized protein.	0.871
A0A482WQW8	A0A482XTT3	Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family.	Uncharacterized protein.	0.866
A0A482WU97	A0A482X1U5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.842
A0A482WU97	A0A482X3E6	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.703
A0A482WU97	A0A482X481	Uncharacterized protein.	Uncharacterized protein.	0.932
A0A482WU97	A0A482XA63	Uncharacterized protein.	Uncharacterized protein.	0.928
A0A482WU97	A0A482XDZ8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.842
A0A482WU97	A0A482XTT3	Uncharacterized protein.	Uncharacterized protein.	0.871
A0A482X1U5	A0A482WQM0	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.842
A0A482X1U5	A0A482WU97	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.842
A0A482X1U5	A0A482X481	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.964
A0A482X1U5	A0A482XA63	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.939
A0A482X1U5	A0A482XP38	WD_REPEATS_REGION domain-containing protein.	Tr-type G domain-containing protein.	0.842
A0A482X1U5	A0A482XTT3	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.916
A0A482X3E6	A0A482WQM0	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.703

page 1 of 4

Network Stats

number of nodes:

10

number of edges:

26

average node degree:

5.2

avg. local clustering coefficient:

0.882

expected number of edges:

10

PPI enrichment p-value:

1.6e-05

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:1901615

Organic hydroxy compound metabolic process

3 of 19

1.59

0.75

0.0304

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0051539

4 iron, 4 sulfur cluster binding

6 of 30

1.7

2.58

2.21e-07

GO:0051536

Iron-sulfur cluster binding

8 of 74

1.43

2.19

3.15e-08

GO:0009055

Electron transfer activity

4 of 18

1.74

1.82

9.00e-05

GO:0016491

Oxidoreductase activity

7 of 131

1.12

1.21

2.22e-05

GO:0071949

FAD binding

2 of 3

2.22

1.14

0.0074

(more ...)

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:1086

Mixed, incl. Electron transport chain, and 2-Oxocarboxylic acid metabolism

9 of 67

1.52

2.78

1.74e-10

CL:1184

Electron transport, and FAD binding

5 of 18

1.84

2.57

1.31e-06

CL:1093

Citrate cycle (TCA cycle), and 4Fe-4S binding domain

4 of 23

1.64

1.6

0.00022

CL:900

Small molecule metabolic process, and Electron transport chain

10 of 191

1.11

1.49

6.90e-09

CL:1187

Electron transport

2 of 6

1.92

0.84

0.0253

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map01120

Microbial metabolism in diverse environments

7 of 119

1.17

1.32

9.65e-06

map01200

Carbon metabolism

4 of 68

1.17

0.87

0.0039

map00630

Glyoxylate and dicarboxylate metabolism

2 of 14

1.55

0.69

0.0399

map00020

Citrate cycle (TCA cycle)

2 of 16

1.49

0.68

0.0405

map01100

Metabolic pathways

10 of 852

0.47

0.37

0.0033

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0004

4Fe-4S

4 of 28

1.55

1.34

0.00082

KW-1278

Translocase

3 of 20

1.57

1.13

0.0035

KW-0677

Repeat

2 of 12

1.62

0.72

0.0373

KW-0249

Electron transport

2 of 14

1.55

0.68

0.0419

KW-0560

Oxidoreductase

3 of 50

1.17

0.62

0.0347

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF00037

4Fe-4S binding domain

4 of 8

2.09

2.29

2.55e-05

PF12837

4Fe-4S binding domain

3 of 4

2.27

1.84

0.00031

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