STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BZK31_05805Amino acid ABC transporter substrate-binding protein. (275 aa)    
Predicted Functional Partners:
BZK31_21540
Amino acid ABC transporter permease/ATP-binding protein.
  
 0.793
BZK31_06880
Hybrid sensor histidine kinase/response regulator.
 
 
 0.759
BZK31_19430
Hybrid sensor histidine kinase/response regulator.
  
 0.758
BZK31_19680
Histidine kinase.
   
 0.754
BZK31_19960
Prephenate dehydrogenase.
    
 0.743
BZK31_19955
Chorismate mutase.
    
 0.730
BZK31_00670
Hybrid sensor histidine kinase/response regulator.
   
 0.721
BZK31_13530
Hybrid sensor histidine kinase/response regulator.
   
 0.721
BZK31_09620
Two-component system response regulator.
    
 0.720
BZK31_02350
Hybrid sensor histidine kinase/response regulator.
   
 0.713
Your Current Organism:
Pseudomonas floridensis
NCBI taxonomy Id: 1958950
Other names: ATCC TSD-90, LMG 30013, LMG:30013, P. floridensis, Pseudomonas floridae, Pseudomonas floridensis Timilsina et al. 2018, Pseudomonas sp. GEV358, Pseudomonas sp. GEV388, Pseudomonas sp. GEV392, strain GEV388
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.