STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BZK31_16490Polyhydroxyalkanoic acid system protein. (92 aa)    
Predicted Functional Partners:
BZK31_16500
Poly(Hydroxyalkanoate) granule-associated protein.
 
     0.849
BZK31_16495
Poly(3-hydroxyalkanoate) granule-associated protein PhaI.
 
     0.813
BZK31_03560
General secretion pathway protein GspM.
  
     0.582
BZK31_16480
SCP2 domain-containing protein.
       0.579
ubiB
Probable protein kinase UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis.
       0.577
ubiE
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
       0.575
BZK31_13535
YCII domain-containing protein.
  
     0.490
BZK31_21025
Acetyl-CoA hydrolase.
  
     0.484
hisE
Phosphoribosyl-ATP pyrophosphatase.
       0.480
hisI
Phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.
       0.480
Your Current Organism:
Pseudomonas floridensis
NCBI taxonomy Id: 1958950
Other names: ATCC TSD-90, LMG 30013, LMG:30013, P. floridensis, Pseudomonas floridae, Pseudomonas floridensis Timilsina et al. 2018, Pseudomonas sp. GEV358, Pseudomonas sp. GEV388, Pseudomonas sp. GEV392, strain GEV388
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