STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK84765.1Mannose ABC transporter ATP-binding protein. (256 aa)    
Predicted Functional Partners:
SFK84808.1
Mannose-binding protein /fructose-binding protein /ribose-binding protein.
 
  0.994
SFK84785.1
Mannose ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
  0.974
SFK84826.1
Transcriptional regulator, MarR family.
 
     0.851
SFK80651.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
  0.796
SFL27509.1
D-xylose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.790
SFL27525.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-).
 
 0.760
SFK80631.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
  
  0.757
SFL09218.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.734
SFL30648.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
  0.731
SFK72740.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
   
  0.704
Your Current Organism:
Loktanella salsilacus
NCBI taxonomy Id: 195913
Other names: Antarctic bacterium R-8904, CIP 108322, DSM 16199, JCM 21636, L. salsilacus, LMG 21507, LMG:21507, Loktanella salsilacus Van Trappen et al. 2004, NBRC 102486, Tanella salinilacus
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