STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK88246.1Carbohydrate ABC transporter membrane protein 1, CUT1 family. (290 aa)    
Predicted Functional Partners:
SFK88227.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.983
SFK88261.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
  0.979
SFK88279.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
  0.979
SFK88189.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  0.968
SFK88206.1
Predicted small integral membrane protein.
 
    0.932
SFK93775.1
Sorbitol ABC transporter membrane protein.
 
 0.810
SFK88298.1
Homodimeric glycerol 3-phosphate dehydrogenase (quinone); Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
       0.777
SFL17962.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.767
SFK85926.1
Maltose-binding protein /trehalose-binding protein /sucrose-binding protein.
   
 0.765
SFL30504.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.759
Your Current Organism:
Loktanella salsilacus
NCBI taxonomy Id: 195913
Other names: Antarctic bacterium R-8904, CIP 108322, DSM 16199, JCM 21636, L. salsilacus, LMG 21507, LMG:21507, Loktanella salsilacus Van Trappen et al. 2004, NBRC 102486, Tanella salinilacus
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