STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK96735.1Tellurite resistance protein. (138 aa)    
Predicted Functional Partners:
lysS
lysyl-tRNA synthetase, class I; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.711
SFL11492.1
Hypothetical protein.
  
     0.626
SFK96753.1
Phospholipase_D-nuclease N-terminal.
 
     0.623
SFL23764.1
Nucleotide-binding universal stress protein, UspA family.
  
     0.582
SFL07590.1
DnaJ like chaperone protein.
  
     0.557
SFL12335.1
HemY protein.
  
     0.551
SFK86223.1
Hypothetical protein.
  
     0.550
SFL23555.1
Hypothetical protein.
  
     0.534
SFK96709.1
Protein of unknown function.
       0.528
SFL08116.1
Transcriptional regulator, MarR family.
  
     0.511
Your Current Organism:
Loktanella salsilacus
NCBI taxonomy Id: 195913
Other names: Antarctic bacterium R-8904, CIP 108322, DSM 16199, JCM 21636, L. salsilacus, LMG 21507, LMG:21507, Loktanella salsilacus Van Trappen et al. 2004, NBRC 102486, Tanella salinilacus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.