Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFK84745.1 | SFL14044.1 | SAMN04488004_10311 | SAMN04488004_108175 | Sodium/proton antiporter, CPA1 family. | Arabinose-5-phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily. | 0.766 |
SFK84745.1 | SFL17020.1 | SAMN04488004_10311 | SAMN04488004_10981 | Sodium/proton antiporter, CPA1 family. | cation:H+ antiporter. | 0.444 |
SFL14044.1 | SFK84745.1 | SAMN04488004_108175 | SAMN04488004_10311 | Arabinose-5-phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily. | Sodium/proton antiporter, CPA1 family. | 0.766 |
SFL14044.1 | SFL17020.1 | SAMN04488004_108175 | SAMN04488004_10981 | Arabinose-5-phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily. | cation:H+ antiporter. | 0.646 |
SFL16994.1 | SFL17011.1 | SAMN04488004_10979 | SAMN04488004_10980 | Transcriptional regulator, GntR family. | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | 0.775 |
SFL16994.1 | SFL17020.1 | SAMN04488004_10979 | SAMN04488004_10981 | Transcriptional regulator, GntR family. | cation:H+ antiporter. | 0.440 |
SFL17011.1 | SFL16994.1 | SAMN04488004_10980 | SAMN04488004_10979 | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | Transcriptional regulator, GntR family. | 0.775 |
SFL17011.1 | SFL17020.1 | SAMN04488004_10980 | SAMN04488004_10981 | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | cation:H+ antiporter. | 0.440 |
SFL17020.1 | SFK84745.1 | SAMN04488004_10981 | SAMN04488004_10311 | cation:H+ antiporter. | Sodium/proton antiporter, CPA1 family. | 0.444 |
SFL17020.1 | SFL14044.1 | SAMN04488004_10981 | SAMN04488004_108175 | cation:H+ antiporter. | Arabinose-5-phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily. | 0.646 |
SFL17020.1 | SFL16994.1 | SAMN04488004_10981 | SAMN04488004_10979 | cation:H+ antiporter. | Transcriptional regulator, GntR family. | 0.440 |
SFL17020.1 | SFL17011.1 | SAMN04488004_10981 | SAMN04488004_10980 | cation:H+ antiporter. | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | 0.440 |
SFL17020.1 | SFL32774.1 | SAMN04488004_10981 | SAMN04488004_11440 | cation:H+ antiporter. | Hypothetical protein. | 0.487 |
SFL32774.1 | SFL17020.1 | SAMN04488004_11440 | SAMN04488004_10981 | Hypothetical protein. | cation:H+ antiporter. | 0.487 |