Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFL19472.1 | SFL19487.1 | SAMN04488004_11014 | SAMN04488004_11015 | Hypothetical protein. | Protein of unknown function. | 0.556 |
SFL19472.1 | SFL19504.1 | SAMN04488004_11014 | SAMN04488004_11016 | Hypothetical protein. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.401 |
SFL19472.1 | SFL19557.1 | SAMN04488004_11014 | SAMN04488004_11019 | Hypothetical protein. | Adenosine deaminase. | 0.401 |
SFL19472.1 | deoA | SAMN04488004_11014 | SAMN04488004_11017 | Hypothetical protein. | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | 0.401 |
SFL19472.1 | deoB | SAMN04488004_11014 | SAMN04488004_11018 | Hypothetical protein. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.401 |
SFL19472.1 | upp | SAMN04488004_11014 | SAMN04488004_11020 | Hypothetical protein. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.401 |
SFL19487.1 | SFL19472.1 | SAMN04488004_11015 | SAMN04488004_11014 | Protein of unknown function. | Hypothetical protein. | 0.556 |
SFL19487.1 | SFL19504.1 | SAMN04488004_11015 | SAMN04488004_11016 | Protein of unknown function. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.538 |
SFL19487.1 | SFL19557.1 | SAMN04488004_11015 | SAMN04488004_11019 | Protein of unknown function. | Adenosine deaminase. | 0.538 |
SFL19487.1 | deoA | SAMN04488004_11015 | SAMN04488004_11017 | Protein of unknown function. | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | 0.538 |
SFL19487.1 | deoB | SAMN04488004_11015 | SAMN04488004_11018 | Protein of unknown function. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.538 |
SFL19487.1 | upp | SAMN04488004_11015 | SAMN04488004_11020 | Protein of unknown function. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.538 |
SFL19504.1 | SFL19472.1 | SAMN04488004_11016 | SAMN04488004_11014 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Hypothetical protein. | 0.401 |
SFL19504.1 | SFL19487.1 | SAMN04488004_11016 | SAMN04488004_11015 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Protein of unknown function. | 0.538 |
SFL19504.1 | SFL19557.1 | SAMN04488004_11016 | SAMN04488004_11019 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Adenosine deaminase. | 0.910 |
SFL19504.1 | deoA | SAMN04488004_11016 | SAMN04488004_11017 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | 0.999 |
SFL19504.1 | deoB | SAMN04488004_11016 | SAMN04488004_11018 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.948 |
SFL19504.1 | upp | SAMN04488004_11016 | SAMN04488004_11020 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.924 |
SFL19557.1 | SFL19472.1 | SAMN04488004_11019 | SAMN04488004_11014 | Adenosine deaminase. | Hypothetical protein. | 0.401 |
SFL19557.1 | SFL19487.1 | SAMN04488004_11019 | SAMN04488004_11015 | Adenosine deaminase. | Protein of unknown function. | 0.538 |
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