STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL23527.1Peptidase family M23. (321 aa)    
Predicted Functional Partners:
SFL23515.1
ATP-dependent Clp protease ATP-binding subunit ClpA; Belongs to the ClpA/ClpB family.
  
    0.850
gloB
Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
       0.555
SFL08653.1
Hypothetical protein.
  
     0.549
SFK85497.1
Hint domain-containing protein.
  
  
  0.545
SFL08941.1
Putative peptidoglycan binding domain-containing protein.
  
   
 0.499
SFL19592.1
Sporulation related domain-containing protein.
  
    0.487
SFL50119.1
Ca2+-binding protein, RTX toxin-related.
  
     0.467
SFL23488.1
Methyltransferase domain-containing protein.
       0.457
SFL13727.1
Phosphate ABC transporter substrate-binding protein, PhoT family.
 
  
 0.408
SFL29803.1
Flagellar motor switch protein FliM.
  
 
   0.408
Your Current Organism:
Loktanella salsilacus
NCBI taxonomy Id: 195913
Other names: Antarctic bacterium R-8904, CIP 108322, DSM 16199, JCM 21636, L. salsilacus, LMG 21507, LMG:21507, Loktanella salsilacus Van Trappen et al. 2004, NBRC 102486, Tanella salinilacus
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