STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL27730.1Spermidine/putrescine transport system ATP-binding protein. (328 aa)    
Predicted Functional Partners:
SFL27704.1
Spermidine/putrescine transport system permease protein.
  0.997
SFL27718.1
Spermidine/putrescine transport system permease protein.
 
  0.972
SFK87553.1
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
  0.932
SFL27689.1
Spermidine/putrescine transport system substrate-binding protein.
 
 
  0.931
SFL45959.1
Peptide/nickel transport system ATP-binding protein.
 
     
0.899
SFL03913.1
Spermidine/putrescine transport system permease protein.
 
  0.889
SFL46053.1
Putative spermidine/putrescine transport system permease protein.
 
  0.884
SFL03927.1
Spermidine/putrescine transport system permease protein.
 
 
  0.863
SFL21615.1
Putative spermidine/putrescine transport system permease protein.
 
  0.851
SFL46072.1
Putative spermidine/putrescine transport system permease protein.
  
 
  0.842
Your Current Organism:
Loktanella salsilacus
NCBI taxonomy Id: 195913
Other names: Antarctic bacterium R-8904, CIP 108322, DSM 16199, JCM 21636, L. salsilacus, LMG 21507, LMG:21507, Loktanella salsilacus Van Trappen et al. 2004, NBRC 102486, Tanella salinilacus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.