STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL28518.1MoxR-like ATPase. (291 aa)    
Predicted Functional Partners:
SFL28503.1
Uncharacterized conserved protein, contains von Willebrand factor type A (vWA) domain.
 
     0.951
SFL28489.1
Xanthine dehydrogenase accessory factor.
 
     0.874
SFL28533.1
Carbon monoxide dehydrogenase, large subunit apoprotein.
 
     0.872
SFL28567.1
Carbon monoxide dehydrogenase, medium subunit.
 
     0.848
SFL28457.1
Hypothetical protein.
 
     0.824
SFK71682.1
Hypothetical protein.
 
     0.755
SFL36344.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
     0.635
SFL28548.1
Carbon monoxide dehydrogenase, small subunit.
       0.615
SFL36363.1
Carbon-monoxide dehydrogenase medium subunit.
 
     0.609
SFL36306.1
Hypothetical protein.
 
     0.552
Your Current Organism:
Loktanella salsilacus
NCBI taxonomy Id: 195913
Other names: Antarctic bacterium R-8904, CIP 108322, DSM 16199, JCM 21636, L. salsilacus, LMG 21507, LMG:21507, Loktanella salsilacus Van Trappen et al. 2004, NBRC 102486, Tanella salinilacus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.