STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL29960.1Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (290 aa)    
Predicted Functional Partners:
SFL29934.1
Flagellar protein FlaF.
 
  
 0.990
SFL29921.1
Flagellar protein FlbT.
 
  
 0.986
flgK
Flagellar hook-associated protein 1 FlgK.
 
  
 0.978
SFL29645.1
Flagellar basal-body rod protein FlgB.
 
 
 0.970
SFL30049.1
Flagellar hook protein FlgE.
 
  
 0.962
flgH
Flagellar L-ring protein precursor FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.949
SFL29909.1
Protein of unknown function.
 
 
 0.943
SFL29658.1
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
  
 0.926
fliE
Flagellar hook-basal body complex protein FliE.
 
 
 0.924
flgI
Flagellar P-ring protein precursor FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.920
Your Current Organism:
Loktanella salsilacus
NCBI taxonomy Id: 195913
Other names: Antarctic bacterium R-8904, CIP 108322, DSM 16199, JCM 21636, L. salsilacus, LMG 21507, LMG:21507, Loktanella salsilacus Van Trappen et al. 2004, NBRC 102486, Tanella salinilacus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.