STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL32680.1Glutathione S-transferase; Belongs to the GST superfamily. (205 aa)    
Predicted Functional Partners:
SFL19709.1
Glutathione S-transferase; Belongs to the GST superfamily.
  
  
  0.884
gshB
Glutathione synthase; Belongs to the prokaryotic GSH synthase family.
  
  
 0.814
SFL16787.1
Glutathione S-transferase.
  
  
  0.800
SFL14244.1
Glutathione S-transferase.
  
  
  0.795
SFK98024.1
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
  
 
  0.793
SFL08840.1
NADPH-glutathione reductase.
    
 0.779
SFL32697.1
Saccharopine dehydrogenase (NAD+, L-lysine-forming).
       0.774
SFL32666.1
Broad specificity phosphatase PhoE.
       0.753
SFL37525.1
Glutathione S-transferase.
     
 0.745
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.676
Your Current Organism:
Loktanella salsilacus
NCBI taxonomy Id: 195913
Other names: Antarctic bacterium R-8904, CIP 108322, DSM 16199, JCM 21636, L. salsilacus, LMG 21507, LMG:21507, Loktanella salsilacus Van Trappen et al. 2004, NBRC 102486, Tanella salinilacus
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