Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFK69296.1 | SFL35905.1 | SAMN04488004_10110 | SAMN04488004_11555 | PKHD-type hydroxylase. | Hypothetical protein. | 0.532 |
SFK71884.1 | SFL35905.1 | SAMN04488004_101151 | SAMN04488004_11555 | Hypothetical protein. | Hypothetical protein. | 0.539 |
SFK85732.1 | SFK97752.1 | SAMN04488004_10367 | SAMN04488004_105127 | Methyl-accepting chemotaxis protein. | Methyl-accepting chemotaxis protein. | 0.940 |
SFK85732.1 | SFL35905.1 | SAMN04488004_10367 | SAMN04488004_11555 | Methyl-accepting chemotaxis protein. | Hypothetical protein. | 0.499 |
SFK85732.1 | ribA | SAMN04488004_10367 | SAMN04488004_10811 | Methyl-accepting chemotaxis protein. | GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family. | 0.891 |
SFK85732.1 | ribB | SAMN04488004_10367 | SAMN04488004_11049 | Methyl-accepting chemotaxis protein. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.891 |
SFK97752.1 | SFK85732.1 | SAMN04488004_105127 | SAMN04488004_10367 | Methyl-accepting chemotaxis protein. | Methyl-accepting chemotaxis protein. | 0.940 |
SFK97752.1 | SFL35905.1 | SAMN04488004_105127 | SAMN04488004_11555 | Methyl-accepting chemotaxis protein. | Hypothetical protein. | 0.681 |
SFK97752.1 | ribA | SAMN04488004_105127 | SAMN04488004_10811 | Methyl-accepting chemotaxis protein. | GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family. | 0.877 |
SFK97752.1 | ribB | SAMN04488004_105127 | SAMN04488004_11049 | Methyl-accepting chemotaxis protein. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.877 |
SFL11543.1 | SFL35905.1 | SAMN04488004_10829 | SAMN04488004_11555 | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | Hypothetical protein. | 0.480 |
SFL11543.1 | SFL35932.1 | SAMN04488004_10829 | SAMN04488004_11557 | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | Hypothetical protein. | 0.503 |
SFL35905.1 | SFK69296.1 | SAMN04488004_11555 | SAMN04488004_10110 | Hypothetical protein. | PKHD-type hydroxylase. | 0.532 |
SFL35905.1 | SFK71884.1 | SAMN04488004_11555 | SAMN04488004_101151 | Hypothetical protein. | Hypothetical protein. | 0.539 |
SFL35905.1 | SFK85732.1 | SAMN04488004_11555 | SAMN04488004_10367 | Hypothetical protein. | Methyl-accepting chemotaxis protein. | 0.499 |
SFL35905.1 | SFK97752.1 | SAMN04488004_11555 | SAMN04488004_105127 | Hypothetical protein. | Methyl-accepting chemotaxis protein. | 0.681 |
SFL35905.1 | SFL11543.1 | SAMN04488004_11555 | SAMN04488004_10829 | Hypothetical protein. | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | 0.480 |
SFL35905.1 | SFL35920.1 | SAMN04488004_11555 | SAMN04488004_11556 | Hypothetical protein. | LAO/AO transport system kinase. | 0.775 |
SFL35905.1 | SFL35932.1 | SAMN04488004_11555 | SAMN04488004_11557 | Hypothetical protein. | Hypothetical protein. | 0.484 |
SFL35905.1 | ribA | SAMN04488004_11555 | SAMN04488004_10811 | Hypothetical protein. | GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family. | 0.732 |
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