STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL36414.1NitT/TauT family transport system permease protein. (259 aa)    
Predicted Functional Partners:
SFL53360.1
Taurine transport system substrate-binding protein.
 
 
 0.969
tauB
Taurine transport system ATP-binding protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family.
 
 
 0.964
SFL36165.1
NitT/TauT family transport system substrate-binding protein.
 
 
  0.875
SFL36181.1
NitT/TauT family transport system ATP-binding protein.
 
 
  0.859
SFL36213.1
ABC-2 type transport system permease protein.
  
     0.765
SFL36262.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
     0.762
SFL36229.1
ABC-2 type transport system ATP-binding protein.
  
  
  0.754
SFL36245.1
PQQ-dependent catabolism-associated beta-propeller protein.
 
     0.743
SFK87357.1
NitT/TauT family transport system ATP-binding protein.
 
 
  0.697
SFK72303.1
Nitrate/nitrite transport system ATP-binding protein.
  
 
  0.648
Your Current Organism:
Loktanella salsilacus
NCBI taxonomy Id: 195913
Other names: Antarctic bacterium R-8904, CIP 108322, DSM 16199, JCM 21636, L. salsilacus, LMG 21507, LMG:21507, Loktanella salsilacus Van Trappen et al. 2004, NBRC 102486, Tanella salinilacus
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