STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL38611.1N-6 DNA Methylase. (274 aa)    
Predicted Functional Partners:
SFL38646.1
Type I restriction enzyme, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
 
 0.998
SFL38628.1
Type I restriction enzyme, S subunit.
 
 
 0.997
SFL38571.1
HsdM N-terminal domain-containing protein.
     0.987
SFL48569.1
Type I restriction enzyme M protein.
 
 
 0.985
SFL38682.1
Hypothetical protein.
       0.775
SFL38664.1
Hypothetical protein.
       0.773
SFL48585.1
Type I restriction enzyme, R subunit.
  
 
 0.768
SFK90730.1
Putative ATP-dependent endonuclease of the OLD family.
  
  
 0.600
SFL38699.1
Hypothetical protein.
       0.533
SFL65469.1
Superfamily I DNA and/or RNA helicase.
  
    0.447
Your Current Organism:
Loktanella salsilacus
NCBI taxonomy Id: 195913
Other names: Antarctic bacterium R-8904, CIP 108322, DSM 16199, JCM 21636, L. salsilacus, LMG 21507, LMG:21507, Loktanella salsilacus Van Trappen et al. 2004, NBRC 102486, Tanella salinilacus
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