STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL39757.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (521 aa)    
Predicted Functional Partners:
SFL39773.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.997
SFL39785.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 
 0.995
SFL39804.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
  0.905
SFL39738.1
Heparinase II/III-like protein.
    0.889
SFL39823.1
Na+-driven multidrug efflux pump.
 
     0.839
SFK93775.1
Sorbitol ABC transporter membrane protein.
  
  0.749
SFL39718.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
     0.748
SFL15777.1
Predicted dehydrogenase.
  
     0.734
SFK88227.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.685
SFL30504.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.685
Your Current Organism:
Loktanella salsilacus
NCBI taxonomy Id: 195913
Other names: Antarctic bacterium R-8904, CIP 108322, DSM 16199, JCM 21636, L. salsilacus, LMG 21507, LMG:21507, Loktanella salsilacus Van Trappen et al. 2004, NBRC 102486, Tanella salinilacus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.