STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL40136.1Response regulator receiver protein. (271 aa)    
Predicted Functional Partners:
SFL28213.1
PAS domain S-box-containing protein.
  
 0.984
SFK91710.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.982
SFK71022.1
Signal transduction histidine kinase.
  
 0.963
SFL17709.1
PAS domain S-box-containing protein.
  
 0.961
SFL15983.1
PAS domain S-box-containing protein.
  
 0.961
SFL31116.1
PAS domain S-box-containing protein.
  
 0.961
SFL28398.1
PAS domain S-box-containing protein.
 
 0.953
SFL47694.1
Two-component sensor histidine kinase, contains HisKA and HATPase domains.
 
 0.953
SFL65043.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.952
SFL28314.1
Ligand-binding sensor domain-containing protein.
  
 0.911
Your Current Organism:
Loktanella salsilacus
NCBI taxonomy Id: 195913
Other names: Antarctic bacterium R-8904, CIP 108322, DSM 16199, JCM 21636, L. salsilacus, LMG 21507, LMG:21507, Loktanella salsilacus Van Trappen et al. 2004, NBRC 102486, Tanella salinilacus
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