Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFK87093.1 | SFL12523.1 | SAMN04488004_103142 | SAMN04488004_10890 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Protein SCO1/2. | 0.908 |
SFK87093.1 | SFL20916.1 | SAMN04488004_103142 | SAMN04488004_11098 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | NAD-dependent formate dehydrogenase flavoprotein subunit. | 0.990 |
SFK87093.1 | SFL43092.1 | SAMN04488004_103142 | SAMN04488004_11859 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Thiol-disulfide isomerase or thioredoxin. | 0.817 |
SFK87093.1 | SFL44716.1 | SAMN04488004_103142 | SAMN04488004_11950 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Protein SCO1/2. | 0.904 |
SFK90895.1 | SFK98024.1 | SAMN04488004_10433 | SAMN04488004_105148 | 1-Cys peroxiredoxin. | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | 0.968 |
SFK90895.1 | SFL43092.1 | SAMN04488004_10433 | SAMN04488004_11859 | 1-Cys peroxiredoxin. | Thiol-disulfide isomerase or thioredoxin. | 0.966 |
SFK98024.1 | SFK90895.1 | SAMN04488004_105148 | SAMN04488004_10433 | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | 1-Cys peroxiredoxin. | 0.968 |
SFK98024.1 | SFL43092.1 | SAMN04488004_105148 | SAMN04488004_11859 | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | Thiol-disulfide isomerase or thioredoxin. | 0.862 |
SFK98024.1 | SFL57567.1 | SAMN04488004_105148 | SAMN04488004_12924 | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | Thiol:disulfide interchange protein DsbD. | 0.411 |
SFL12523.1 | SFK87093.1 | SAMN04488004_10890 | SAMN04488004_103142 | Protein SCO1/2. | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.908 |
SFL12523.1 | SFL43092.1 | SAMN04488004_10890 | SAMN04488004_11859 | Protein SCO1/2. | Thiol-disulfide isomerase or thioredoxin. | 0.845 |
SFL20916.1 | SFK87093.1 | SAMN04488004_11098 | SAMN04488004_103142 | NAD-dependent formate dehydrogenase flavoprotein subunit. | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.990 |
SFL20916.1 | SFL43092.1 | SAMN04488004_11098 | SAMN04488004_11859 | NAD-dependent formate dehydrogenase flavoprotein subunit. | Thiol-disulfide isomerase or thioredoxin. | 0.890 |
SFL43092.1 | SFK87093.1 | SAMN04488004_11859 | SAMN04488004_103142 | Thiol-disulfide isomerase or thioredoxin. | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.817 |
SFL43092.1 | SFK90895.1 | SAMN04488004_11859 | SAMN04488004_10433 | Thiol-disulfide isomerase or thioredoxin. | 1-Cys peroxiredoxin. | 0.966 |
SFL43092.1 | SFK98024.1 | SAMN04488004_11859 | SAMN04488004_105148 | Thiol-disulfide isomerase or thioredoxin. | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | 0.862 |
SFL43092.1 | SFL12523.1 | SAMN04488004_11859 | SAMN04488004_10890 | Thiol-disulfide isomerase or thioredoxin. | Protein SCO1/2. | 0.845 |
SFL43092.1 | SFL20916.1 | SAMN04488004_11859 | SAMN04488004_11098 | Thiol-disulfide isomerase or thioredoxin. | NAD-dependent formate dehydrogenase flavoprotein subunit. | 0.890 |
SFL43092.1 | SFL44716.1 | SAMN04488004_11859 | SAMN04488004_11950 | Thiol-disulfide isomerase or thioredoxin. | Protein SCO1/2. | 0.855 |
SFL43092.1 | SFL57567.1 | SAMN04488004_11859 | SAMN04488004_12924 | Thiol-disulfide isomerase or thioredoxin. | Thiol:disulfide interchange protein DsbD. | 0.917 |
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