STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL44319.1Carbohydrate ABC transporter membrane protein 2, CUT1 family. (281 aa)    
Predicted Functional Partners:
SFL44281.1
Multiple sugar transport system substrate-binding protein.
 
  0.998
SFL44301.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  0.984
SFL44247.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  0.950
SFL44335.1
Alpha-galactosidase.
 
    0.945
SFL17983.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  0.926
SFK91457.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  0.912
SFK85937.1
Maltose ABC transporter membrane protein.
  0.904
SFK85962.1
Maltose ABC transporter ATP-binding protein/trehalose ABC transporter ATP-binding protein/sucrose ABC transporter ATP-binding protein.
  0.902
SFL44436.1
Beta-galactosidase.
    0.899
SFK91497.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  0.895
Your Current Organism:
Loktanella salsilacus
NCBI taxonomy Id: 195913
Other names: Antarctic bacterium R-8904, CIP 108322, DSM 16199, JCM 21636, L. salsilacus, LMG 21507, LMG:21507, Loktanella salsilacus Van Trappen et al. 2004, NBRC 102486, Tanella salinilacus
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