STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL49852.1NTE family protein. (343 aa)    
Predicted Functional Partners:
SFL37190.1
Alpha/beta hydrolase fold.
  
  
 0.554
SFL55367.1
Type IV secretion system protein VirD4.
  
 
   0.550
SFL08340.1
Polyhydroxyalkanoate synthase.
 
   
 0.533
SFL59956.1
Polyhydroxyalkanoate synthase.
 
   
 0.526
SFK92557.1
Uncharacterized membrane protein.
  
     0.444
SFL53690.1
Thiaminase (transcriptional activator TenA); Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family.
  
 
  0.439
SFL07951.1
Alpha/beta hydrolase family protein.
    
 0.438
SFK78417.1
Phospholipase/carboxylesterase.
 
  
  0.422
SFL32537.1
Long-chain acyl-CoA synthetase.
  
 
 0.410
SFL08373.1
Polyhydroxyalkanoate synthesis repressor PhaR.
 
     0.405
Your Current Organism:
Loktanella salsilacus
NCBI taxonomy Id: 195913
Other names: Antarctic bacterium R-8904, CIP 108322, DSM 16199, JCM 21636, L. salsilacus, LMG 21507, LMG:21507, Loktanella salsilacus Van Trappen et al. 2004, NBRC 102486, Tanella salinilacus
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