STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL56062.1Meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase. (269 aa)    
Predicted Functional Partners:
SFL56085.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
     0.929
SFL56035.1
Xaa-Pro aminopeptidase.
 
 
   0.912
SFL14207.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.854
SFL56107.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
     0.849
SFL56171.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
     0.806
SFL56151.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
     0.782
SFL56016.1
2-deoxy-D-gluconate 3-dehydrogenase.
 
    
0.676
SFL55994.1
2-dehydro-3-deoxy-L-fuconate dehydrogenase.
 
    
0.644
rbsA-2
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
     0.631
SFL02401.1
[Acyl-carrier-protein] S-malonyltransferase.
 
  0.626
Your Current Organism:
Loktanella salsilacus
NCBI taxonomy Id: 195913
Other names: Antarctic bacterium R-8904, CIP 108322, DSM 16199, JCM 21636, L. salsilacus, LMG 21507, LMG:21507, Loktanella salsilacus Van Trappen et al. 2004, NBRC 102486, Tanella salinilacus
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