STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL57699.1Glyoxylase, beta-lactamase superfamily II. (317 aa)    
Predicted Functional Partners:
SFL24719.1
Hypothetical protein.
  
     0.729
SFL24774.1
Sulfur dehydrogenase subunit SoxD.
 
   
 0.724
SFL57806.1
Hypothetical protein.
  
     0.723
SFL24864.1
Diheme cytochrome SoxA (sulfur oxidation).
 
     0.718
SFL24906.1
Thiosulfate-binding protein SoxY.
 
     0.707
SFL62102.1
Sulfite reductase (NADPH) flavoprotein alpha-component.
    
  0.687
SFL24884.1
Sulfur compound chelating protein SoxZ.
 
     0.680
SFL24803.1
Sulfur dehydrogenase subunit SoxC.
 
 
  0.677
SFL24846.1
Sulfate thiol esterase SoxB; Belongs to the 5'-nucleotidase family.
 
    0.670
SFL24947.1
Thioredoxin-like domain-containing protein.
  
     0.667
Your Current Organism:
Loktanella salsilacus
NCBI taxonomy Id: 195913
Other names: Antarctic bacterium R-8904, CIP 108322, DSM 16199, JCM 21636, L. salsilacus, LMG 21507, LMG:21507, Loktanella salsilacus Van Trappen et al. 2004, NBRC 102486, Tanella salinilacus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.