STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMN03159343_0294Pimeloyl-ACP methyl ester carboxylesterase. (248 aa)    
Predicted Functional Partners:
SAMN03159343_0293
Phosphatidate phosphatase APP1.
       0.775
SAMN03159343_3061
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.714
SAMN03159343_1678
3-oxoadipate enol-lactonase.
  
     0.683
SAMN03159343_0751
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.679
SAMN03159343_0027
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.648
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
  0.616
SAMN03159343_2691
Lysophospholipase, alpha-beta hydrolase superfamily.
  
     0.602
SAMN03159343_2699
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.573
SAMN03159343_0295
Phytoene desaturase.
  
    0.569
SAMN03159343_3027
3-oxoadipate enol-lactonase.
  
     0.556
Your Current Organism:
Klenkia marina
NCBI taxonomy Id: 1960309
Other names: Actinobacteria bacterium DSM 45722, CCTCC AB 2012057, CCTCC:AB:2012057, DSM 45722, Geodermatophilus sp. YIM M1316, K. marina, Klenkia marina Montero-Calasanz et al. 2018, YIM M13156
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.