STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMN03159343_0331Sulfite reductase (Ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (552 aa)    
Predicted Functional Partners:
SAMN03159343_0332
Phosphoadenylyl-sulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
 
 0.999
SAMN03159343_0742
Uroporphyrinogen-III C-methyltransferase.
 
 
 0.985
SAMN03159343_0330
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
 
 
 0.968
SAMN03159343_1737
Sulfate adenylyltransferase.
 
 
 0.963
SAMN03159343_0539
Ferredoxin--NADP+ reductase.
  
 
 0.957
SAMN03159343_1735
Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
 
 
 0.956
SAMN03159343_2419
Glutamate synthase (NADPH/NADH) large chain.
   
 
 0.943
SAMN03159343_2724
Cystathionine gamma-lyase.
  
 0.941
SAMN03159343_1810
Uroporphyrinogen-III synthase.
 
 
 0.918
SAMN03159343_0717
Precorrin-6Y C5,15-methyltransferase (Decarboxylating).
    
 0.881
Your Current Organism:
Klenkia marina
NCBI taxonomy Id: 1960309
Other names: Actinobacteria bacterium DSM 45722, CCTCC AB 2012057, CCTCC:AB:2012057, DSM 45722, Geodermatophilus sp. YIM M1316, K. marina, Klenkia marina Montero-Calasanz et al. 2018, YIM M13156
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